networks

• What is a network, elements, applications, methods to study them

• From PPI networks to functional networks

• Adding resolution to the networks, 3D, regulation of PPIs, kinases

• Protein-chemical networks

• Applications in Transcriptomics: Network methods to describe a gene signature.

• Applications in Genomics: Network methods for catching new candidate genes.

• Cytoscape exercises (STRING + Cytoscape)

Download cytoscape here: https://cytoscape.org

chmod 755 Cytoscape_3_10_1_unix.sh

./Cytoscape_3_10_1_unix.sh and follow instructions

In case something goes wrong, needs java 11: sudo apt-get install openjdk-11-jdk